Potential Microplastic-Degrading Bacteria from Mangrove Sediment in The Paluh Getah Area, Percut Sei Tuan District

Authors

Ahmad Shafwan S. Pulungan , Larasati Arum Utami , Marlinda Nilan Sari Rangkuti , Ayu Putri Ningsih , Cindy Suci Muliandhira

DOI:

10.29303/jppipa.v11i10.12647

Published:

2025-10-25

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Abstract

Microplastic pollution poses a severe threat to marine ecosystems due to its persistence and toxicity, necessitating innovative biodegradation strategies. This study explored the potential of bacteria isolated from mangrove sediments of the Paluh Getah mangrove forest, North Sumatra, to degrade common microplastics, including LDPE, HDPE, PET, PP, and PS. Ten bacterial isolates were obtained and screened for their ability to grow on microplastic-supplemented mineral salt medium over 20 days. Three isolates (BPM 5, BPM 9, and BPM 10) demonstrated robust growth, with biochemical tests confirming catalase activity critical for managing oxidative stress during plastic degradation. Molecular identification via 16S rRNA gene sequencing revealed the isolates as Enterobacter sp. and Brevibacillus parabrevis, both known for their biodegradation capacities. The findings underscore the diverse metabolic pathways these bacteria employ to utilize microplastics as carbon sources. This research highlights the promise of mangrove sediment bacteria as eco-friendly bioremediation agents to mitigate microplastic pollution in coastal environments. Further studies are required to optimize degradation conditions and elucidate enzymatic mechanisms to enhance practical applications.

Keywords:

Biodegradation, Brevibacillus parabrevis, Enterobacter sp, Mangrove, Microplastic, Sediment Bacteria

References

Alam, M., Nahar, S., Chowdhury, M., Hasan, M., Islam, M., & Sikdar, B. (2019). Biochemical Characterization of Bacteria Responsible for Bacterial Black Pit Disease of Lime (Citrus aurantifolia) and Their Control System. European Journal of Biotechnology and Bioscience, 7(2), 16–22. Retrieved from https://shorturl.asia/YbNRw

Alifia, L., Zulaika, E., Soeprijanto, S., Hamzah, A., & Luqman, A. (2024). Microbial Diversity and Biotechnological Potential of Mangrove Leaf Litter in Kebun Raya Mangrove, Surabaya, Indonesia. Brazilian Journal of Biology, 84, 1–11. https://doi.org/10.1590/1519-6984.288968

Apriliya, I., Prasetyo, D., & Selvany, R. (2021). Isolasi Bakteri Rhizosfer Resisten Pestisida dan Herbisida pada Berbagai Jenis Tutupan Lahan. Agrotekma Jurnal Agroteknologi Dan Ilmu Pertanian, 5(1), 64–71. https://doi.org/doi.org/10.31289/agr.v5i1.4466

Arumugam, T., Senthil Kumar, P., Hemavathy, R. V., Swetha, V., & Karishma Sri, R. (2018). Isolation, Structure Elucidation and Anticancer Activity from Brevibacillus brevis EGS 9 that combats Multi Drug Resistant actinobacteria. Microbial Pathogenesis, 115, 146–153. https://doi.org/10.1016/j.micpath.2017.12.061

Dissanayake, P. D., Kim, S., Sarkar, B., Patryk, O., Sang, M. K., Haque, M. N., Ahn, J. H., Bank, M. S., & Ok, Y. S. (2022). Effects of Microplastics on The Terrestrial Environment: A Critical Review. Environmental Research, 209(112734), 112–116. https://doi.org/10.1016/j.envres.2022.112734.

Fang, X., Cai, Z., Wang, X., Liu, Z., Lin, Y., Li, M., Gong, H., & Yan, M. (2024). Isolation and Identification of Four Strains of Bacteria with Potential to Biodegrade Polyethylene and Polypropylene from Mangrove. Microorganisms, 12(10), 1–19. https://doi.org/10.3390/microorganisms12102005

Fauziyah, Q., Ramdan, E. P., & Yukti, A. M. (2022). Deteksi Bakteri Patogen Terbawa Benih Kedelai dengan Metode Liquid Assay. Jurnal Agronida, 8(1), 9–15. https://doi.org/10.30997/jag.v8i1.4837

Febriyanti, S. V., Utomo, K. P., & Sulastri, A. (2024). Analisis Bentuk Mikroplastik pada Sedimen Pantai Mangrove di Kalimantan Barat. Journal of Marine Research, 13(2), 231–238. https://doi.org/10.14710/jmr.v13i2.36714

Hening, J. L., Kamelia, M., & Kesuma, A. J. (2025). Identification and Characterization of Microplastic Degrading Bacteria in Three Landfills of Lampung Province. Bioteknologi & Biosains Indonesia, 12(1), 144–156. https://doi.org/10.55981/jbbi.2025.11318

Marchesi, J. R., Sato, T., Weightman, A. J., Martin, T. A., Fry, J. C., Hiom, S. J., & Wade, W. G. (1998). Design and Evaluation of Useful Bacterium-Specific PCR Primers That Amplify Genes Coding for Bacterial 16S rRNA. Applied and Environmental Microbiology, 64(2), 795–799. https://doi.org/10.1128/AEM.64.2.795-799.1998

Mardalisa, M., Fatwa, E. B., Yoswaty, D., Feliatra, F., Effendi, I., & Amin, B. (2021). Isolation and Identification of Indigenous Plastic-Degrading Bacteria from Dumai’s Ocean Water of Riau Province. Ilmu Perairan (Aquatic Science), 9(1), 77–85. https://doi.org/10.31258/jipas.9.1.p.77-85

Mayanti, L., Rahayu, Y. P., Lubis, M. S., & Yuniarti, R. (2023). Analisis Cemaran Bakteri Coliform pada Saus Jajanan di Sekitar Sekolah Menengah Kejuruan di Kota Medan. Journal of Pharmaceutical and Sciences, 6(3), 1282–1289. https://doi.org/10.36490/journal-jps.com.v6i3.206

Newaz, A. W., Yong, K., Yi, W., Wu, B., & Zhang, Z. (2023). Antimicrobial Metabolites from The Indonesian Mangrove Sediment-Derived Fungus Penicillium chrysogenum sp. ZZ1151. Natural Product Research, 37(10), 1702–1708. https://doi.org/10.1080/14786419.2022.2103813

Ni’am, A. C., Ainiyah, S. I., Ratnawati, R., & Setiawan, I. (2024). Potensi Bakteri Sedimen Mangrove dalam Mendegradasi Plastik Menggunakan Metode Kolom Winogradsky. Jurnal Reka Lingkungan, 12(1), 1–10. https://doi.org/10.26760/rekalingkungan.v12i1.1-10

Novitasari, A. R., Satyantini, W. H., Andriyono, S., & Sa’adah, N. (2023). Isolasi dan Identifikasi Bakteri Pengurai Mikroplastik Polyethylene Terephthalate dari Sedimen Ekosistem Mangrove Pasir Putih. Journal of Marine Research, 12(1), 52–60. https://doi.org/10.14710/jmr.v12i1.37503

Putri, R. R., Widyorini, N., & Jati, O. E. (2021). Analisis Perbedaan Kelimpahan Bakteri Heterotrof dengan Kandungan Bahan Organik pada Sedimen di Ekosistem Mangrove Trimulyo, Kecamatan Genuk, Kota Semarang. Jurnal Pasir Laut, 5(1), 32–39. https://doi.org/10.14710/jpl.2021.32270

Qiu, L., Yin, X., Liu, T., Zhang, H., Chen, G., & Wu, S. (2020). Biodegradation of bis(2-hydroxyethyl) terephthalate by A Newly Isolated Enterobacter sp. HY1 and Characterization of Its Esterase Properties. Journal of Basic Microbiology, 60(8), 699–711. https://doi.org/10.1002/jobm.202000053

Rajan, L., Chakraborty, K., & Chakraborty, R. D. (2020). Pharmacological Properties of Some Mangrove Sediment-Associated Bacillus Isolates. Archives of Microbiology, 203(1), 67–76. https://doi.org/10.1007/s00203-020-01999-5

Ren, S. Y., & Ni, H. G. (2023). Biodeterioration of Microplastics by Bacteria Isolated from Mangrove Sediment. Toxics, 11(5), 1–14. https://doi.org/10.3390/toxics11050432

Rochman, C. M., Tahir, A., Williams, S. L., Baxa, D. V., Lam, R., Miller, J. T., Teh, F. C., Werorilangi, S., & Teh, S. J. (2015). Anthropogenic Debris in Seafood: Plastic Debris and Fibers from Textiles in Fish and Bivalves Sold for Human Consumption. Scientific Reports, 5(14340), 1–10. https://doi.org/10.1038/srep14340

Septiana, L., Susanti, E., Haryani, Y., Rani, Z., & Rambe, R. (2024). Penapisan dan Karakterisasi Bakteri Selulolitik Termofilik. Forte Journal, 4(2), 472–480. https://doi.org/10.51771/fj.v4i2.974

Skariyachan, S., Taskeen, N., Kishore, A. P., Krishna, B. V., & Naidu, G. (2021). Novel Consortia of Enterobacter and Pseudomonas Formulated from Cow Dung Exhibited Enhanced Biodegradation of Polyethylene and Polypropylene. Journal of Environmental Management, 284, 112030–112049. https://doi.org/10.1016/j.jenvman.2021.112030

Tiralerdpanich, P., Nasaree, S., Pinyakong, O., & Sonthiphand, P. (2021). Variation of The Mangrove Sediment Microbiomes and Their Phenanthrene Biodegradation Rates During The Dry and Wet Seasons. Environmental Pollution, 289(117849). https://doi.org/10.1016/j.envpol.2021.117849

Tiwari, N., Santhiya, D., & Sharma, J. G. (2023). Degradation of Polyethylene Microplastics Through Microbial Action by A Soil Isolate of Brevibacillus brevis. Polymer Degradation and Stability, 215, 110436–110445. https://doi.org/doi.org/10.1016/j.polymdegradstab.2023.110436

Uthra, K. T., Chitra, V., Damodharan, N., Devadoss, A., Kuehnel, M., Exposito, A. J., Nagarajan, S., Pitchaimuthu, S., & Pazhani, G. P. (2023). Microplastic Emerging Pollutants - Impact on Microbiological Diversity, Diarrhea, Antibiotic Resistance, and Bioremediation. Environmental Science: Advances, 2(11), 1469–1487. https://doi.org/10.1039/d3va00084b

Wiratno, E. N., Wardani, E. S., & Agustin, N. (2024). Abundance and Phylogenetic Analysis of High-Density Polyethylene (Hdpe) Biodegrading Bacteria from Brantas River, Malang City. Biotropika: Journal of Tropical Biology, 12(2), 103–109. https://doi.org/10.21776/ub.biotropika.2024.012.02.06

Yuan, F., Yin, S., Xu, Y., Xiang, L., Wang, H., Li, Z., Fan, K., & Pan, G. (2021). The Richness and Diversity of Catalases in Bacteria. Frontiers in Microbiology, 12(March), 1–11. https://doi.org/10.3389/fmicb.2021.645477

Zhang, C. J., Liu, Y. R., Cha, G., Liu, Y., Zhou, X. Q., Lu, Z., Pan, J., Cai, M., & Li, M. (2023). Potential for Mercury Methylation by Asgard Archaea in Mangrove Sediments. ISME Journal, 17(3), 478–485. https://doi.org/10.1038/s41396-023-01360-w

Author Biographies

Ahmad Shafwan S. Pulungan, Universitas Negeri Medan

Larasati Arum Utami, Universitas Negeri Medan

Marlinda Nilan Sari Rangkuti, Universitas Negeri Medan

Ayu Putri Ningsih, Universitas Negeri Medan

Cindy Suci Muliandhira, Universitas Negeri Medan

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How to Cite

Pulungan, A. S. S., Utami, L. A., Rangkuti, M. N. S., Ningsih, A. P., & Muliandhira, C. S. (2025). Potential Microplastic-Degrading Bacteria from Mangrove Sediment in The Paluh Getah Area, Percut Sei Tuan District. Jurnal Penelitian Pendidikan IPA, 11(10), 243–249. https://doi.org/10.29303/jppipa.v11i10.12647