Effects of Shrimp Aquaculture Effluent on the Habitat Suitability for Macrozoobenthos along the Situbondo Coast
DOI:
10.29303/jppipa.v12i2.13571Published:
2026-02-25Downloads
Abstract
Shrimp aquaculture generates wastewater that may affect coastal ecosystem quality if not properly managed. This study aimed to analyze the relationship between shrimp pond effluent quality and macrozoobenthos diversity as an indicator of habitat suitability in the coastal waters of Situbondo, Indonesia. Wastewater samples were collected from pond outlet wastewater treatment plants (WWTP) in triplicate and analyzed for physicochemical parameters, including phosphate (PO₄), ammonia (NH₃), total suspended solids (TSS), biochemical oxygen demand (BOD), and pH. Macrozoobenthos samples were collected at three distances from the discharge point and analyzed using the Shannon–Wiener diversity index (H'). Data were further analyzed using multiple linear regression and Canonical Correspondence Analysis (CCA) to evaluate the relationship between environmental variables and macrozoobenthos diversity. The results showed that PO₄ concentrations at all stations exceeded the environmental quality standard (0.5 mg/L), while NH₃ concentrations exceeded the standard (5 mg/L) at four stations. TSS levels also exceeded the permitted threshold (100 mg/L) at several stations, whereas BOD and pH remained within acceptable limits. The macrozoobenthos diversity index indicated moderate diversity at stations 1 and 2 (H' ≈ 2), suggesting moderate environmental stress, while stations 3, 4, and 5 showed low diversity (H' < 1), indicating polluted conditions. Regression analysis indicated that nutrient and suspended solid parameters negatively influenced macrozoobenthos diversity, with PO₄ and NH₃ showing the strongest effects. The findings demonstrate that shrimp pond effluent can alter benthic community structure and confirm that macrozoobenthos are effective bioindicators for assessing ecological impacts in coastal ecosystems.
Keywords:
Macrozoobenthos Shannon diversity index Shrimp ponds Situbondo coast Water quality parametersReferences
Afzal, M., Tahir, F., & Al‐Ghamdi, S. (2023). The role of environmental impact assessment in the sustainable artificial island development: A Qatar's Island case study. Cleaner Environmental Systems, 9, 100111. https://doi.org/10.1016/j.cesys.2023.100111 DOI: https://doi.org/10.1016/j.cesys.2023.100111
Aued, A., Smith, F., Quimbayo, J., Cândido, D., Longo, G., Ferreira, C., … & Segal, B. (2018). Large-scale patterns of benthic marine communities in the Brazilian Province. Plos One, 13(6), e0198452. https://doi.org/10.1371/journal.pone.0198452 DOI: https://doi.org/10.1371/journal.pone.0198452
Bachtiar, A. F., Yuniarti, M. S., Ihsan, Y. N. I. Y. N., & Pasaribu, B. (2024). Analisis Variabilitas Tss, Klorofil-A, dan Algae Bloom pada Daerah Limpasan Pembuangan Tambak Udang dan Muara Sungai di Perairan Laut Desa Mandrajaya, Teluk Ciletuh, Sukabumi. Blantika: Multidisciplinary Journal, 2(6), 563–574. https://doi.org/10.57096/blantika.v2i6.149 DOI: https://doi.org/10.57096/blantika.v2i6.149
Bierschenk, A., Savage, C., & Matthaei, C. (2017). Intensity of catchment land use influences biological traits of benthic invertebrates along a freshwater–marine continuum. Limnology and Oceanography, 62(S1). https://doi.org/10.1002/lno.10584 DOI: https://doi.org/10.1002/lno.10584
Bluhm, B., & Gradinger, R. (2008). Regional variability in food availability for Arctic marine mammals. Ecological Applications, 18(sp2), S77–S96. https://doi.org/10.1890/06-0562.1 DOI: https://doi.org/10.1890/06-0562.1
Castro-Cubillos, M., Taylor, J., Mastretta‐Yanes, A., Benítez‐Villalobos, F., & Islas‐Villanueva, V. (2022). Monitoring of benthic eukaryotic communities in two tropical coastal lagoons through eDNA metabarcoding: A spatial and temporal approximation. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-13653-9 DOI: https://doi.org/10.1038/s41598-022-13653-9
Chen, L., Lutaenko, K., Li, X., Li, X., Zhou, Z., Li, B., … & Tarasova, T. (2020). Long‐term changes of marine subtidal benthic communities in North East Asia (Yellow and Japan seas) in a global change context: A review. Aquatic Conservation: Marine and Freshwater Ecosystems, 30(7), 1451–1475. https://doi.org/10.1002/aqc.3334 DOI: https://doi.org/10.1002/aqc.3334
Chris, D., & Amaewhule, E. (2022). Zooplankton and benthic fauna composition of Isaka-bundu mangrove swamp, Niger delta, Nigeria: A polluted tidal mangrove tropical creek. International Journal of Science and Research Archive, 6(2), 174–183. https://doi.org/10.30574/ijsra.2022.6.2.0157 DOI: https://doi.org/10.30574/ijsra.2022.6.2.0157
Duarte, S., Vieira, P. E., Leite, B. R., Teixeira, M. A., Neto, J. M., & Costa, F. O. (2022). Comparing DNA metabarcoding with morphology in the assessment of macrozoobenthos in Portuguese transitional waters in the scope of the water framework directive monitoring. Biorxiv, 2022-05. https://doi.org/10.1101/2022.05.10.491303 DOI: https://doi.org/10.1101/2022.05.10.491303
Fadilla, R. N., Melani, W. R., & Apriadi, T. (2021). Habitus Aquatica Makrozoobentos sebagai bioindikator kualitas perairan di Desa Pengujan Kabupaten Bintan Makrozoobentos as a bioindicator of water quality in Pengujan Village , Bintan Regency. Journal of Aquatic Resources and Fisheries Management, 2(2), 83–94. Retrieved from https://journal.ipb.ac.id/indekx.php/habitusaquatica DOI: https://doi.org/10.29244/HAJ.2.1.83
Fahrurrozi, A., Wijianto, W., Linayati, L., & Syakirin, M. B. (2023). Dinamika Kualitas Air Budidaya Litopenaeus vannamei di Tambak Intensif Wilayah Pesisir Kecamatan Pemalang Kabupaten Pemalang Dynamics of Water Quality for Litopenaeus vannamei Aquaculture in Coastal Area Intensive Ponds, Pemalang District, Pemalang Rege. Jurnal Grouper, 14(1), 49–58. Retrieved from https://grouper.unisla.ac.id/index.php/grouper/article/view/140/pdf DOI: https://doi.org/10.30736/grouper.v14i1.140
Gao, X., Li, W., Zhang, Y., Song, H., Li, Y., & Li, H. (2024). Integrated assessment of ecological quality combining biological and environmental data in the Yellow River Estuary. Water, 16(11), 1615. https://doi.org/10.3390/w16111615 DOI: https://doi.org/10.3390/w16111615
Hamuna, B., Tanjung, R. H. R., Suwito, S., Maury, H. K., & Alianto, A. (2018). Kajian Kualitas Air Laut dan Indeks Pencemaran Berdasarkan Parameter Fisika-Kimia Di Perairan Distrik Depapre, Jayapura. Jurnal Ilmu Lingkungan, 16(1), 35–43. https://doi.org/10.14710/jil.16.135-43 DOI: https://doi.org/10.14710/jil.16.1.35-43
Harmayani, K. D., Jaya, N. M. P., Widhiawati, I. A. R., Parahita, I. G. A. A., Wiryananda, N. G. A. K., Supriyani, N. N. D., Mahendra, D. R., Baskhara, I. G. A. G. W., & Hutagalung, D. S. F. (2023). Assessment of Surface Water Quality Status Using the Pollution Index Method in Tukad Badung River. Jurnal Presipitasi : Media Komunikasi Dan Pengembangan Teknik Lingkungan, 20(1), 175–185. https://doi.org/10.14710/presipitasi.v20i1.175-185 DOI: https://doi.org/10.14710/presipitasi.v20i1.175-185
Herawati, T., Faddilah, T. N., Hasan, Z., Ihsan, Y. N., Arief, M. C. W., Ghazali, A. B., Kamiswara, R., Nurhayati, A., & Pasaribu, B. (2025). The Impact of Shrimp Farming Waste in Pangandaran Coastal Park, Indonesia (Case Study: Sea Turtle Landing Habitat). Egyptian Journal of Aquatic Biology and Fisheries, 29(2), 31–50. https://doi.org/10.21608/ejabf.2025.415624 DOI: https://doi.org/10.21608/ejabf.2025.415624
Herawati, T., Pauwwaz, M., Zahidah, Z., Apriliani, I. M., & Yustiati, A. (2024). Fish Community Structure in The Coastal Mangrove Ecosystem of Cemara Kulon Village Indramayu Regency, Indonesia. Jurnal Biodjati, 9(1), 154–171. https://doi.org/10.15575/biodjati.v9i1.34123 DOI: https://doi.org/10.15575/biodjati.v9i1.34123
Hoellein, T., Rojas, M., Adam, P., Gasior, J., & Kelly, J. (2014). Anthropogenic litter in urban freshwater ecosystems: Distribution and microbial interactions. Plos One, 9(6), e98485. https://doi.org/10.1371/journal.pone.0098485 DOI: https://doi.org/10.1371/journal.pone.0098485
Imran, M. A., Sugiharto, E., & Siswanta, D. (2014). Penggunaan Model Regresi Linier untuk Menyatakan Hubungan Fungsional Penggunaan Model Regresi Linier untuk Menyatakan Hubungan Fungsional Perubahan Konsentrasi Oksigen Terlarut terhadap Parameter Fisika-kimia Air Sungai Secang Kulon Progo. Berkala MIPA, 24(2), 206–218. Retrieved from https://journal.ugm.ac.id/bimipa/article/view/13839
Izzah, N. A., & Roziaty, E. (2016). Keanekaragaman Makrozoobentos Di Pesisir Pantai Desa Panggung Kecamatan Kedung Kabupaten Jepara. Bioeksperimen: Jurnal Penelitian Biologi, 2(2), 140. https://doi.org/10.23917/bioeksperimen.v2i2.2492 DOI: https://doi.org/10.23917/bioeksperimen.v2i2.2492
Kim, S., Oh, K., Ra, K., & Yu, O. (2024). Effects of freshwater inflow during the rainy season on the benthic polychaete community in the Geum River Estuary, South Korea. Diversity, 16(3), 180. https://doi.org/10.3390/d16030180 DOI: https://doi.org/10.3390/d16030180
Lammertsma, E., Troelstra, S., Flores, J., Sangiorgi, F., Chemale, F., Carmo, D., … & Hoorn, C. (2018). Primary productivity in the western tropical Atlantic follows Neogene Amazon River evolution. Palaeogeography, Palaeoclimatology, Palaeoecology, 506, 12–21. https://doi.org/10.1016/j.palaeo.2018.05.048 DOI: https://doi.org/10.1016/j.palaeo.2018.05.048
Lecher, A., & Mackey, K. (2018). Synthesizing the effects of submarine groundwater discharge on marine biota. Hydrology, 5(4), 60. https://doi.org/10.3390/hydrology5040060 DOI: https://doi.org/10.3390/hydrology5040060
Li, Y., Wang, L., Ning, J., Xu, L., Huang, D., Liu, S., … & Du, F. (2021). Assessment of the ecological status of Rongjiang Estuary (China) under human pressure using biotic indices based on benthic macroinvertebrates. Frontiers in Environmental Science, 9. https://doi.org/10.3389/fenvs.2021.728196 DOI: https://doi.org/10.3389/fenvs.2021.728196
Liang, J., Ma, C., & Kim, K. (2025). Differences in subtidal macrobenthic community structures and influencing factors between Jindo and Jeju Islands in South Korea. Ecology and Evolution, 15(2). https://doi.org/10.1002/ece3.70990 DOI: https://doi.org/10.1002/ece3.70990
Liwu, S. S., Vincentius, A., & Rume, M. I. (2023). Pertumbuhan dan kelangsungan hidup udang vaname (Litopenaeus Vannamei) di tambak intensif Balai PerikananBudi Daya Air Payau Takalar, Sulawesi Selatan. Jurnal Ilmu Kelautan Dan Perikanan, 05(02), 70–83. Retrieved from http://repository.nusanipa.ac.id/id/eprint/852/1/62-131-1-SM.pdf
Maulana, M. A., & Kuntjoro, S. (2023). Hubungan Indeks Keanekaragaman Makrozoobentos dengan Kualitas Air Kali Surabaya, Wringinanom, Gresik. LenteraBio : Berkala Ilmiah Biologi, 12(2), 219–228. https://doi.org/10.26740/lenterabio.v12n2.p219-228 DOI: https://doi.org/10.26740/lenterabio.v12n2.p219-228
McCormick, A., & Hoellein, T. (2016). Anthropogenic litter is abundant, diverse, and mobile in urban rivers: Insights from cross-ecosystem analyses using ecosystem and community ecology tools. Limnology and Oceanography, 61(5), 1718–1734. https://doi.org/10.1002/lno.10328 DOI: https://doi.org/10.1002/lno.10328
Mustofa, A. (2017). Kandungan Total Zat Padat Tersuspensi Dari Outlet Tambak. Disprotek, 8(1), 34–45. Retrieved from https://ejournal.unisnu.ac.id/JDPT/article/view/484
Pérez‐Asensio, J., & Ramírez, A. (2020). Benthic foraminiferal salinity index in marginal-marine environments: A case study from the Holocene Guadalquivir estuary, SW Spain. Palaeogeography, Palaeoclimatology, Palaeoecology, 560, 110021. https://doi.org/10.1016/j.palaeo.2020.110021 DOI: https://doi.org/10.1016/j.palaeo.2020.110021
Purushothaman, A., & Krishnan, A. (2024). Impact assessment of ports and effluent discharge on macrobenthic communities in Indian coastal ecosystems: A comprehensive review. Environmental Quality Management, 34(2). https://doi.org/10.1002/tqem.22341 DOI: https://doi.org/10.1002/tqem.22341
Ridwan, M., Fathoni, R., Fatihah, I., & Pangestu, D. A. (2016). Kata kunci : Makrozoobenthos; Pulau Dua; Struktur komunitas. Jurnal Biologi, 9(1), 57–65. https://doi.org/10.15408/kauniyah.v9i1.3256 DOI: https://doi.org/10.15408/kauniyah.v9i1.3256
Rohani, S., Kurniah, & Gappar, A. (2015). Dinamika padatan tersuspensi total (Tolat Suspended Solid) pada tambak udang vaname super intensif. Buletin Teknik Litkayasa Akuakultur, 13(1), 61–65. http://dx.doi.org/10.15578/blta.13.1.2015.61-65 DOI: https://doi.org/10.15578/blta.11.1.2013.61-65
Romadhona, B., Yulianto, B., & Sudarno, S. (2016). Fluctuations of Ammonia and Pollution load in Intensive Vannamei Shrimp Pond Harvested Using Partial and Total Method. Saintek Perikanan : Indonesian Journal of Fisheries Science and Technology, 11(2), 84. https://doi.org/10.14710/ijfst.11.2.84-93 DOI: https://doi.org/10.14710/ijfst.11.2.84-93
Rosdatina, Y., Apriadi, T., & Melani, W. R. (2019). Makrozoobentos sebagai bioindikator kualitas perairan Pulau Penyengat, Kepulauan Riau. Jurnal Pengelolaan Lingkungan Berkelanjutan (Journal of Environmental Sustainability Management), 3(2), 309–317. https://doi.org/10.36813/jplb.3.2.309-317 DOI: https://doi.org/10.36813/jplb.3.2.309-317
Seike, K., Banno, M., Watanabe, K., Kuwae, T., Arai, M., & Sato, H. (2020). Benthic filtering reduces the abundance of primary producers in the bottom water of an open sandy beach system (Kashimanada Coast, Japan). Geophysical Research Letters, 47(1). https://doi.org/10.1029/2019gl085338 DOI: https://doi.org/10.1029/2019GL085338
Simon-Sánchez, L., Grelaud, M., García-Orellana, J., & Ziveri, P. (2019). River deltas as hotspots of microplastic accumulation: The case study of the Ebro River (NW Mediterranean). Science of the Total Environment, 687, 1186–1196. https://doi.org/10.1016/j.scitotenv.2019.06.168 DOI: https://doi.org/10.1016/j.scitotenv.2019.06.168
Stassen, P., Thomas, E., & Speijer, R. (2012). Integrated stratigraphy of the Paleocene–Eocene thermal maximum in the New Jersey Coastal Plain: Toward understanding the effects of global warming in a shelf environment. Paleoceanography, 27(4). https://doi.org/10.1029/2012pa002323 DOI: https://doi.org/10.1029/2012PA002323
Sugiura, S. H. (2025). Urinary phosphorus excretion in fish: environmental and aquaculture implications. Aquatic Living Resources, 38. https://doi.org/10.1051/alr/2025004 DOI: https://doi.org/10.1051/alr/2025004
Suokhrie, T., Saraswat, R., & Nigam, R. (2021). Multiple ecological parameters affect living benthic foraminifera in the river-influenced west-central Bay of Bengal. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.656757 DOI: https://doi.org/10.3389/fmars.2021.656757
Tang, Y., Wang, B., Li, D., Ma, X., Jiang, Z., Liao, Y., & Shou, L. (2024). Long-term change of summer benthic macroinvertebrates driven by multiple stresses in the Changjiang Estuary. https://doi.org/10.21203/rs.3.rs-3991304/v1 DOI: https://doi.org/10.21203/rs.3.rs-3991304/v1
Xu, L., McIlroy, S., Ni, Y., Guibert, I., Chen, J., Rocha, U., & Panagiotou, G. (2025). Chemical pollution drives taxonomic and functional shifts in marine sediment microbiome, influencing benthic metazoans. ISME Communications, 5(1). https://doi.org/10.1093/ismeco/ycae141 DOI: https://doi.org/10.1093/ismeco/ycae141
Zhang, Y., Guan, B., Liu, Y., Li, F., Li, S., & Li, Y. (2013). Status of macrobenthic community and its relationships to trace metals and natural sediment characteristics. Clean - Soil Air Water, 41(10), 1027–1034. https://doi.org/10.1002/clen.201200575 DOI: https://doi.org/10.1002/clen.201200575
License
Copyright (c) 2026 Salimatul Muntafi’ah, Hartati Kartikaningsih, Fitri Candra Wardana, Wresti L. Anggayasti

This work is licensed under a Creative Commons Attribution 4.0 International License.
Authors who publish with Jurnal Penelitian Pendidikan IPA, agree to the following terms:
- Authors retain copyright and grant the journal right of first publication with the work simultaneously licensed under a Creative Commons Attribution 4.0 International License (CC-BY License). This license allows authors to use all articles, data sets, graphics, and appendices in data mining applications, search engines, web sites, blogs, and other platforms by providing an appropriate reference. The journal allows the author(s) to hold the copyright without restrictions and will retain publishing rights without restrictions.
- Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the journal's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgment of its initial publication in Jurnal Penelitian Pendidikan IPA.
- Authors are permitted and encouraged to post their work online (e.g., in institutional repositories or on their website) prior to and during the submission process, as it can lead to productive exchanges, as well as earlier and greater citation of published work (See The Effect of Open Access).






